MOMD:
Mouse Oral Microbiome Database
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MOMD Genome Explorer
Selected genome:
Lactobacillus johnsonii
19428wE2_CC3
Change genome:
Available genomes
1. Actinomyces bowdenii WMus004.1
2. Bacteroides acidifaciens 19428wH3_P2318
3. Bacteroides acidifaciens 8_33DSS_C5_S8
4. Citrobacter koseri 19428wH4_BL23
5. Dysgonomonas mossii 19428wE4_P11
6. Enterococcus gallinarum 19428wB3_C2
7. Enterococcus gallinarum ENT.1
8. Escherichia coli 19428wD4_HM13
9. Gemella palaticanis CIP106318T.1
10. Gemella sp. 19428wG2_WT2a
11. Gemella sp. GH3.1
12. Gemella sp. GL1.1
13. Granulicatella sp. 19428wC4_WM01
14. Jeotgalicoccus nanhaiensis 19428wE5_W307
15. Lactobacillus johnsonii 19428wE2_CC3
16. Lactobacillus murinus LAC.1
17. Ligilactobacillus murinus 19428wF2_HT12
18. Ligilactobacillus murinus 2_2BalbC1BO2_S2
19. Mammaliicoccus lentus 19428wC1_HT5
20. Mammaliicoccus lentus 19428wG1_AE2
21. Mammaliicoccus lentus 3_3BalbC2O2_S3
22. Mammaliicoccus sciuri 19428wE1_BL01
23. Mammaliicoccus sciuri ACT.1
24. Microbacterium paludicola 19428wA4_P1012
25. Micrococcus aloeverae 19428wE3_DK2
26. Micrococcus yunnanensis 19428wG4_IOV6
27. Muribacter muris 19428wC3_WT12
28. Muribacter muris 7_18CXCR221ANO_S7
29. Neisseria sp. 19428wB4_WF04
30. Parabacteroides goldsteinii 19428wG3_P14
31. Pasteurella sp. 19428wF3_WM03
32. Proteus mirabilis 19428wB5_irhom_Sw
33. Providencia alcalifaciens WMus003.1
34. Rothia nasimurium 19428wA5_irhom_31
35. Sanguibacter inulinus DSM100099.1
36. Shigella flexneri 19428wH2_1568
37. Staphylococcus arlettae 19428wH1_IOV5
38. Staphylococcus aureus 19428wD1_P36
39. Staphylococcus aureus 4_5BalbC4O2_S4
40. Staphylococcus aureus STF.1
41. Staphylococcus capitis GW2.1
42. Staphylococcus saprophyticus 19428wB1_WM06
43. Staphylococcus warneri 19428wF1_P912
44. Staphylococcus xylosus 19428wA1_WT6
45. Streptococcus acidominimus 19428wB2_HT4
46. Streptococcus acidominimus 6_8CXCR23O2_S6
47. Streptococcus cuniculi 19428wD2_WM131
48. Streptococcus danieliae 1_1BalbC1O2_S1
49. Streptococcus danieliae STR.1
50. Streptococcus sp. 19428wA2_WM07
51. Streptococcus sp. 19428wC2_LYSM12
52. Streptococcus sp. 19428wD3_AN2
from a total of 52 genomes
Available tools:
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PROKKA Annotation
NCBI Annotation
BLAST Against Genome
Genome Info
Taxon Description
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PROKKA Genome Annotation:
contigs: 101
bases: 1,925,316 bps
CDS: 1,771
rRNA: 9
Repeat region:
tmRNA: 1
tRNA: 60
misc RNA:
Total features: 1,841
Total number of protein coding genes annotated/found:
1,771
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Items 21 - 40
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Molecule ^
PID/GenBank ID *^
Sequences
Size (NA/AA) ^
Range ^
Gene Product Name
SEQF5026|JADGKX010000010.1
SEQF5026_00043
Genome Viewer
NA
AA
279/93
32009-32287
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00044
Genome Viewer
NA
AA
213/71
32342-32554
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00045
Genome Viewer
NA
AA
327/109
32599-32925
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00046
Genome Viewer
NA
AA
360/120
32925-33284
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00047
Genome Viewer
NA
AA
759/253
33290-34048
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00048
Genome Viewer
NA
AA
744/248
34062-34805
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00049
Genome Viewer
NA
AA
318/106
34811-35128
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00050
Genome Viewer
NA
AA
615/205
35149-35763
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00051
Genome Viewer
NA
AA
336/112
35767-36102
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00052
Genome Viewer
NA
AA
747/249
36095-36841
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00053
Genome Viewer
NA
AA
213/71
36841-37053
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00054
Genome Viewer
NA
AA
198/66
37046-37243
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00055
Genome Viewer
NA
AA
264/88
37247-37510
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00056
Genome Viewer
NA
AA
243/81
37507-37749
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00057
Genome Viewer
NA
AA
303/101
37753-38055
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00058
Genome Viewer
NA
AA
300/100
38129-38428
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00059
Genome Viewer
NA
AA
462/154
38425-38886
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00060
Genome Viewer
NA
AA
342/114
38892-39233
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00061
Genome Viewer
NA
AA
222/74
39247-39468
hypothetical protein
SEQF5026|JADGKX010000010.1
SEQF5026_00062
Genome Viewer
NA
AA
285/95
39656-39940
hypothetical protein
🡄
Items 21 - 40
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of 89 pages
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* Click GI, UID, Gene Product to go to NCBI record
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Copyright 2020 Forsyth Institute
Page last updated: July 7, 2021 08:39:35
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